CDS

Accession Number TCMCG048C37737
gbkey CDS
Protein Id XP_031259481.1
Location complement(join(1125470..1125726,1125971..1126103,1126249..1126776,1127963..1128196,1130114..1130393,1130477..1132284,1132380..1132445,1132845..1132970,1133234..1133614,1133722..1133903,1133990..1134126,1134967..1135424,1135847..1136299,1136397..1136658,1136754..1136894,1137004..1137184,1137465..1137804,1137896..1138154,1138269..1138461,1138943..1139280,1139370..1139444,1139534..1139750,1139878..1140078,1141730..1141912,1144175..1144278,1145303..1145376,1145497..1145575,1146851..1146895,1147843..1148000,1148835..1148960,1149075..1149143))
Gene LOC116117601
GeneID 116117601
Organism Pistacia vera

Protein

Length 2695aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA578116
db_source XM_031403621.1
Definition small subunit processome component 20 homolog isoform X2 [Pistacia vera]

EGGNOG-MAPPER Annotation

COG_category V
Description Small subunit processome component 20 homolog
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03009        [VIEW IN KEGG]
KEGG_ko ko:K14772        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs -

Sequence

CDS:  
ATGGCGACGCCCTCACACGCGCTGGCCGTTAAGTCTCTCAACAAATCTCCCGGCCGCCGCCGCTTTGTCTTCAAGAGTGTCTCACAACGATTAGATGACATCGATATCAATGTTTTCCGAAGCCTTGATAAAGTTAAAACTGCGCCTTCTGAAGAAGGAGGCTCCTTTCTCCGCGATTGTCTATACGAATGGAGGGAATTAAATACTGCCGAGGACTTCATTTCATTATATGTGGAAATAGTTCCTTTTGTAGATAAGCTACCCTCAGTATTGTACCACAAGGAACTGATATTCTCCAAACTTATTTCTAGATTACAAATGAGAGCAAGACTATCACTTGAGCCTATTCTGAGCTTGATTGCAGTTTTATCAAGAGATCTCCTTGAGGATTTTTTACCATTTTTGCCGAGGATTGTCGATTCTTTAGTTTCTCTCCTTGAAAGTGGTGCTGATAGGGAGCCAGAGATTGTTGAGCAGATTTTTACATCTTGGTTTTATATTATGATGTATTTGCAGAAATATCTCATTCGAGACTTAACAAGTGTGCTCAAGGTTACTCTAAAATTAAGATATTACCCAAAGGATTATGTCCAAGAATTTATGGCAGAGGCTACATCATTCTTGCTGAGGAAGGACCGTAAGCAGCTAAAATCAGGTATCAGAAAGATCATGTTAGAGGTTGTGAAGAAACCATCGCCTGAACGAAAATCTGGAGTCAGTGGTTTGCTTTATCATGTTATGAGAGGAGCAGCATCAAGATTCCATTCAGAAGCAGAGCAAGTTTTGAGGTTATTGCTGAGCAATTCGATACTTTCTATTGGTGATAAGTTGAACCAAGGTTCAGATGTTGTTGAAGTTGTGATCTCAGCTTTTCAGAGAATATGTGACAGTTTTGAACCCAAGGAATTACATTTGATGAGCGAATGCTTATATCAGGAAATAATTGACTGTATAGCTAATGGATGCTTGTTGCACCTAAGTAACCTATTGTCGCTACGTATTGCTACCATTCAGATTGATAAGGGTTTTAAGGTTCCTGATCATCAGTCAATGCTTGGGCTTGTGGATCTACTTGTTCGTACATTTGTCATACCTTCAGGTGACGGTAAGGAGGTTGATAAATTATCTGAAGTCATCGATAAAGTTTTGCAACTCATGCTATGCATTCTTGATGGGATACACAGAATTGATGATATGTCCACTGTATCTGACTGTACTTCACAGTGGGCACCTGTATTTAAGTTGAGGAACTCAAGTTTGTTGACATTTATTAGAGGGCTGCTATTGAAGGACCCATGCATACTATATACATTTAGAGTTCATATTTTAAGTGCAATGAATGATCTGATAGAAACTTCAAGTGAAGAAGTTATATGTCTGTTATTGTCCTACTCTGAGAAACTGCGAATGAACCCTCAATACAATAACTTGTTGGATGGAATACCTGAGGGCGTAGTTTCTAGGATTTGCAATTTTCTACAAGAGGAAATCTCTTCTCTGATAAAGATTGTTCGTGGGAATTTATTATCTATTAAATTTGATGAGACCAAGTTGGCTCTGATGTGGGGAGCCATCAGGTGCTATGCTCATATCTTGGATGTGCAAACAAACTCATCTTTGCTTACGGATTTGATAGATGCACTTGATCTTCTTATAAGGAATGATGGTGAAGTTGTTGCAGATGTTCCTAAACACATTTGGCAAAGCCTAGCTGGTGCTGCTTTAACTTCCTATAACGAATGGCATTGGGAGAAAAAATCTGGACTTGAAGAAACAAGTAAAGTTTTGCATCTTGCAAAAACTTGCAAATCATCCTCACAAGTACTAAGTGCTGTTGCTGATTATTTGGATTATGTGCATGGGATTACATTGCAAGAAGACAACAGCCGTAAAGAATACCAGCCAGAGCTCAAAGCAGAAAAGGCTGTGGATGCAGTTGAAACATATGCAGATAATTTGTGCCAATCGGACAAGACTATTCGTGTTCCGACTCTTAGAATTTTATGCCACTATGAACCTTACACTTATGAGACTTCAGCTTCAGATCAGCCCCCTGAGAAGAAAATGAAAACAGAAACCGGGGTTTCTGACCCTAGCAGTGTGGACTTTCATGGCCATAATGTTGTTCAGCTCCTCCTCTCCATTGAGACAACTCCTCTTTCAATATCTACTAGCAGGAAAATTATCCTATTGATCTCTAGAGTACAGATGATTCTATCCGCTGGAAGGATACCTGAAATGTATATACCTGTCTTGTTGAATGGAGTAATTGGAATTCTTCATAATCGTTTTAGCTATCTTTGGAATCCAGCATCTGAGTGCCTTGCAGTTTTGGTTAGCAAGCATGTTGGACTTGTTTGGGATAAATTTGTTGACTATTTTCAACAATGCCAATGCATGTTTCAAAGATCTCATAATCAACTCGACAAGATCAGTTCTGAGTCATATAAGGAGCCTAGTGATTTGGTTGAGCGTTTTAATATATTTGTTTCTCCTGCATCTGATAGCACCCCGTGCGCAACAGTATTGTCCTTGTTGCTCCAGGCTCTACAGAAAATTCCTTTTGTAGTTGAATCTCGGTCGCAACGAATTATATCTCTGTTATTGGAATTTTTGGGCTATGACAGCACTGATCTCACAGGTGTGGGATCATTCAATTCAGATATTTGCAAAGGCAAAGAGTGGAAAGGTGTCCTTAAAGAATGGTTGAACTTGTTGAAACTGATGCGAAATCCCAAGTCCTTCTATAGAAGTCAATTTCTCAAAGATGTTCTACAAAATAGGCTTCTGGATGAAAATGATGCTGAAATACAAATGAAGGTTCTTGATTGCCTTTTGATGTGGAGAGATGGTTTCTTGATTCCATATGATCAGCATCTTAAAAACTTGATCAATTCAAAAAATTTGAGAGAAGAAGTAACAACATGGAGTTTGTCTAGAGAATCTGTTCTGATGGAAGATGCTCACAGAGCTTATCTCGTGCCCTTAGTTATTCGTCTCTTGGTGCCAAAAGTCAGAAAATTGAAGACGCTTGCTTCTCGAAAACAAGCGAGTATATATCACCGAAAGGCACTGCTCGGTTTCATTGCTCAATTAGATGTTGATGAGCTTCCCCTTTTCTTCACATTGTTGATAAAGTCCTTGAATATTATTCCAAAGGGAGCTGATGTTGATGTATTCTGGACCACACCAAACTATACTATGGATAACTTTCATGAACTGAGTTTCTTAAAGTATTTCAACATAGAGAACCTGGCAATCTTGTCTTGGAAGAAGAGTCATGGCTTTCTGCATGTGATTGAGGATGTTTTTGGAGTTTTTGATGAATCGCATATTAGACCTTTTCTTCATCTATTAATGGGATGTGTTGTTCGGATATTGGTAAGCTGCACTTCAAGTATTGTTGCTGCAAAGGGTGGATCCTCTTCAATAAAAGATCATTCAAGTACTGACCTGACTGTACATGAGCATGACAGACCAGTTGGAAATGATGTCCTGACCAGCTCAGCTGTGAAGCAGTTGAAGGATCTAAGATCTTTGTGCCTTAGAATCATTTCTAGTGTTCTCAATAAGTATGATGATCATGATTATGGTTGTGAGTTCTGGGACCTTTTCTTTAAGTCAGTGAAACCTTTAGTTGATGCTTTCAAGCAGGAGGGTTCTAGTAGTGAGAAACCCAGTTCACTGTTTTCTTGTTTTTTGGCTATGAGTAGAAGCCACGAACTGGTATCACTATTGTATAGGGAAAAGAATTTGGTTCCTGATATTTTTTCAATTCTAAGTGTCACTACTGCCTCTGAAGCCATTGTATCTAGTGTTCTCATGTTCATTGAGAACCTCCTGAATCTTGATAGTGAGTTAGGTGATGAGGATAGTGCTATCAATAAACTTCTACTTCCAAACCTTGAGGCACTTATCTGCAGCATGCATTATCGTTTTCAGAGTGCAACCAAGAGGAAATTGCTTAAATCTTCTGGGGAGACAGAGATTAGAATTTTTAAACTGCTATCCAAATACATTAAAGATCCATCTATGGCAAGAAAATTTGTGGATATCTTACTACCCTTCCTAGTGAAGGGTGTTAAAGATTCTGGTTTCTCAGTTAAAATTTTGGATGTTCTTCAAGATATCATACCAGTAGTAGAAACTGGGAGTACCAAAAAGATTCTTAATGCTGTCTGTCCACTACTTGTTTCTGTTGAACTAGAAATGCGGTTGTCTATTTGTCATCTTCTTGTTGAGCTCGCTAAAGCTGATCCTTCTGTGTTCCCTGTGGCAGAACTTGTCAGTCAGTTGAATGCAACATCTTCAGAGGAAATGAACAGCCTTGATTATGATTCTATTGTTGCTGCATATGATAAGATTGACATTGATTTATTCCATACTACAGAAGTGGATTATGCATTACTAATATTGTCACATTGTGTGTATGATATGTCATCAGAAGATCTAATCCTAAGGAAAAGTGCACAGAGGATAATGCTCTTATTTGTTGATTTTTCTTCCCTAATTCTTGACGGAGAAAAGTGTAATGGGCATGAGTCGACTAGAATAGTTGAAGGTTCTTGGACTATTACATCCATTCAGCGTATCATGAAGAACTTTATTTTGAAGCACATGGGGGAAGCAATGAATAGTGGAAGTAAAGTTAAAAAGGAGTGGATTGACTTACTGAGAGAAATGATATTGAAGCTTCCACAACTATCAAATCTTAGTTCATTGAGAGATCTATGCTCTGGGGATACTGAAGTTGATTTTTTCAATAATATTATTCACTTACAGAAACATAGAAGAGCACGGGCACTGACACGTTTTAGGAAAGTCGTCAGTGCAAGCAGTATGCCAGAGGACCTCTTGAATAAAGTGTTTGTCCCACTATTTTTTAGTATGTTGTTTGATGTACAAGATGAAAATGTTAGAAGTGCATGCTCTGAAGCTCTTGCTTCAATTTCTGCTCTTATGGAATGGAAGTCCTACTCTGCTTTGTTGATTAGATGCTTTCAGGAGATGGAGAAGAACCAACAAAAGCAAAAGATTTTGTTGCGACTATTTTGCTCTATTTTGGACCAATTCCATTTCTCAGAAATTTGTTCTGGTCAAGAAGCCAAATACTCTTTGGATGACGCTTTAGGTGCTAATACTAGTCGTACTAATTCTTCATTAGTGGATGACAGAAGTTCAACGATTGTCTCGGAGATAAAGACATGGCTTCATGAAATCATGCTCCCAAAAATACAAAAATTACTGAATTTTGATTCTGAGAAGGTCAATGTTGACATCAGTCGGGCTGCACTGAAACTACTAAAGTTGCTTCCAGGAGACATTATGGACTCCCAACTTCCTAGTATCATCCATCGTATTTCAAACTTTTTAAAGAGTCGTTCAGATTCCATGCGTAATAGTGCTAGATTATCTTTGGCTGATTGTCTGAAGGAGCTGGGGCTGGAATACTTGAAATTTATCTTAGGGGTCTTGCGAGCTACTTTGAAGCGAGGATATGAGATGCATGTGTTGGGATATACTCTTAATTTTATTTTGTCAAAGAATCTTTCGAATCCCATTGGTGGGAAGTTGGATTACTGTTTGGAAGATCTCCTTTCTGCAGTCAAGAATGATATCCTTGGAGATGTTGCTGAAGAGAAAGAGGTGGAAAAAATTGCTTCCAAAATGATTGAAACTAAGAAGCAAAAGTCTTTTGAGACCCTGGAATTGATTGCCAAAAATATAACATTCAAAACCCATGCCTTGAAACTTCTTTCTGTTGTAACAACTCATTTACAGATGCATCTGACTCCTAAAACTAAATCAAAATTGGAAAGTATGCTTAATCACATTGCTGCTGGTATTGATTGCAATCAATCAGTGGATCAGACTGACTTATTTGTCTTTATATATGGCCTAATTGAAGATAGGATGAAAGAGGAAAATGATTTGCATTCGAGTTCAGCCAGTACTGGAACAAATAATCATAAAAGTGATGCAAAAGATAAAACTATTTCTTCAGGCCGAGTTATTGTTGCTAAATCAGCATGTTCTCATCTTATTACAGTGTTTGCTCTTGGGCTTTTGCAGAAGCGTTTAAAGAATCTAAGATCGAACGAGCATGATGAGAAACATTTATCAATGCTAGATTCTTTTGTGACACTGCTTGGAAATTGCCTGAGTTCTAAGTATGAAGATGTTTTATCAGCATCCCTTAGATGCCTTACTTCATTGGTAAGCCTCCCCCTGCCATCTCTAGAATCTCAGGCTGATAAAATAAAAGCAACTCTGCTGGATATTGCCCAAAGCTCACTAAACTCTGGCAGTCCTTTAATGCAGTCATGTCTAAGCTTGTTAACAAAGCTTCTGCGCAGCACGAAAATTACCCTTTCCTCAGACCAACTGCATCTGCTAATTCAGTTTCCTGTGTTCATTGATCTTGAGAGGAATCCTTCTGATGTTGCTCTTTCACTTCTGAAGGCAATTGTTAGTCGCAAGCTAGTGGTTCATGAGATATATGATATTGTAGTTCGAGTTGCAGAATTGATGGTAACAAGTCAAGTCGAATCTATTCGCAAGAAATCTAGTCAGATTTCATTGCAGTTCCTACTTGATTATCATCTATCGGACAAACGATTGCAACAACATTTAGATTTTCTGCTAGCAAATCTGAGTTATGAGCATTCAAGTGGAAGAGAAGCTGTGCTTGAAATGCTCCATGCAATTATAAAGAAATTTCCGCAAACAAAGTTGGATGAGCAATCTCACACATTATTTGTCCATTTGGTGGCTCGTTTGGCTAATGACCATGATAATAAAGTTCGTTCCATGACTGGGGTAGCCATAAAGCTTCTTATTGAACGTATTAACCCACATATGCTTCATTCAATTTTGGAGTATAGTCTATCTTGGTATTTGTGCATGAAGCAGCAACTCTGGAGTGCTGGTGCACAGGTCTTGGGATTACTAGTTGAAGTTATGAAGAGAAACTTTCAAAGGCATATAAGTGCTGTATTGCCAGTGACAAGAAGCATTTTGCAGTCAACTATAAATATAGTTAGAGATGGGCAATTGGATCTTTCTGATGAGGTTACCATCCCTTTTTGGAAAGAGGCATACTATTCCCTAGTGTTGCTGGAGAAGATCCTATGTCAGTTCCCAGACCTTATCTTTGACAGGGACTTGGAGAATATTTGGGAAGCAATTTGTGAGTTGATGTTGCACCCACACACATGGTTGCGAAACAGATCAAATCGCCTTATAGCCTTGTATTTTAGTGCTTTAACTGAAGCTAGCAAACAACATCAAGAGAAAGCAAGAGAAAATTTATTCCTGATGAAGCCAAGTAGAATCTTTATGATAGCTGTTTCTCTATGCTACCAGCTAGAGACCCAACTCACTTTTGATGAGGCTTTCAGCAACCGGATTACCCAAAATCTTGTGTCTGCAATTTGTACTATGCATTCTTTGAGGGAACAAAGGGAGTGTATAGACCCTCACAACTTTTGGTCCGCCCTTGGACCACATGAACAAGGCCTGTTTCTTAAAGCTTTCAAGTTACTTGAATCAAGAAAAGGAAAAGGAATATTTTTGTCTATTATCTCCAGCACATCTGACCAAAATGACCAAGACCAGCCTAAGGATTTTCAATTTTTGCTTGTGTCTAATTTGCTCAGAAAAATGGGAAAGATTGCTCTTCAGAAGGAGGCTGTTCAGATGAAAATCGTCTTCAATAGTTTTAGACTAATTTCATCAGAAATTGGTCCAAGCCACTGCCAGCTTTATGCATACCAAATGCTGCCGTCGTTGTATAAAGTTTGTGAAGGATTTGCTGGAAAGCTTATCACTGATGATATGAAGCAATTAGCACAAGAGGTAAGTGATAGCATACGAAATACGGTAGGCAGTCAGAATTTTGTACAAATCTATAATGAGATCAGAAAGAATCTGAAGCAAAAGAGGGATAAGAGGAAGCAAGAGGAAAAGGTCATGGCTGTTGTCAACCCAGTTCGAAATGCCAAGAGGAAACTGAGGATCGCAGCCAAGCATCGTGTCAACAAGAAAAGAAAGATGATGACAATGAAAATGGGAAGATGGTTGCGTTAG
Protein:  
MATPSHALAVKSLNKSPGRRRFVFKSVSQRLDDIDINVFRSLDKVKTAPSEEGGSFLRDCLYEWRELNTAEDFISLYVEIVPFVDKLPSVLYHKELIFSKLISRLQMRARLSLEPILSLIAVLSRDLLEDFLPFLPRIVDSLVSLLESGADREPEIVEQIFTSWFYIMMYLQKYLIRDLTSVLKVTLKLRYYPKDYVQEFMAEATSFLLRKDRKQLKSGIRKIMLEVVKKPSPERKSGVSGLLYHVMRGAASRFHSEAEQVLRLLLSNSILSIGDKLNQGSDVVEVVISAFQRICDSFEPKELHLMSECLYQEIIDCIANGCLLHLSNLLSLRIATIQIDKGFKVPDHQSMLGLVDLLVRTFVIPSGDGKEVDKLSEVIDKVLQLMLCILDGIHRIDDMSTVSDCTSQWAPVFKLRNSSLLTFIRGLLLKDPCILYTFRVHILSAMNDLIETSSEEVICLLLSYSEKLRMNPQYNNLLDGIPEGVVSRICNFLQEEISSLIKIVRGNLLSIKFDETKLALMWGAIRCYAHILDVQTNSSLLTDLIDALDLLIRNDGEVVADVPKHIWQSLAGAALTSYNEWHWEKKSGLEETSKVLHLAKTCKSSSQVLSAVADYLDYVHGITLQEDNSRKEYQPELKAEKAVDAVETYADNLCQSDKTIRVPTLRILCHYEPYTYETSASDQPPEKKMKTETGVSDPSSVDFHGHNVVQLLLSIETTPLSISTSRKIILLISRVQMILSAGRIPEMYIPVLLNGVIGILHNRFSYLWNPASECLAVLVSKHVGLVWDKFVDYFQQCQCMFQRSHNQLDKISSESYKEPSDLVERFNIFVSPASDSTPCATVLSLLLQALQKIPFVVESRSQRIISLLLEFLGYDSTDLTGVGSFNSDICKGKEWKGVLKEWLNLLKLMRNPKSFYRSQFLKDVLQNRLLDENDAEIQMKVLDCLLMWRDGFLIPYDQHLKNLINSKNLREEVTTWSLSRESVLMEDAHRAYLVPLVIRLLVPKVRKLKTLASRKQASIYHRKALLGFIAQLDVDELPLFFTLLIKSLNIIPKGADVDVFWTTPNYTMDNFHELSFLKYFNIENLAILSWKKSHGFLHVIEDVFGVFDESHIRPFLHLLMGCVVRILVSCTSSIVAAKGGSSSIKDHSSTDLTVHEHDRPVGNDVLTSSAVKQLKDLRSLCLRIISSVLNKYDDHDYGCEFWDLFFKSVKPLVDAFKQEGSSSEKPSSLFSCFLAMSRSHELVSLLYREKNLVPDIFSILSVTTASEAIVSSVLMFIENLLNLDSELGDEDSAINKLLLPNLEALICSMHYRFQSATKRKLLKSSGETEIRIFKLLSKYIKDPSMARKFVDILLPFLVKGVKDSGFSVKILDVLQDIIPVVETGSTKKILNAVCPLLVSVELEMRLSICHLLVELAKADPSVFPVAELVSQLNATSSEEMNSLDYDSIVAAYDKIDIDLFHTTEVDYALLILSHCVYDMSSEDLILRKSAQRIMLLFVDFSSLILDGEKCNGHESTRIVEGSWTITSIQRIMKNFILKHMGEAMNSGSKVKKEWIDLLREMILKLPQLSNLSSLRDLCSGDTEVDFFNNIIHLQKHRRARALTRFRKVVSASSMPEDLLNKVFVPLFFSMLFDVQDENVRSACSEALASISALMEWKSYSALLIRCFQEMEKNQQKQKILLRLFCSILDQFHFSEICSGQEAKYSLDDALGANTSRTNSSLVDDRSSTIVSEIKTWLHEIMLPKIQKLLNFDSEKVNVDISRAALKLLKLLPGDIMDSQLPSIIHRISNFLKSRSDSMRNSARLSLADCLKELGLEYLKFILGVLRATLKRGYEMHVLGYTLNFILSKNLSNPIGGKLDYCLEDLLSAVKNDILGDVAEEKEVEKIASKMIETKKQKSFETLELIAKNITFKTHALKLLSVVTTHLQMHLTPKTKSKLESMLNHIAAGIDCNQSVDQTDLFVFIYGLIEDRMKEENDLHSSSASTGTNNHKSDAKDKTISSGRVIVAKSACSHLITVFALGLLQKRLKNLRSNEHDEKHLSMLDSFVTLLGNCLSSKYEDVLSASLRCLTSLVSLPLPSLESQADKIKATLLDIAQSSLNSGSPLMQSCLSLLTKLLRSTKITLSSDQLHLLIQFPVFIDLERNPSDVALSLLKAIVSRKLVVHEIYDIVVRVAELMVTSQVESIRKKSSQISLQFLLDYHLSDKRLQQHLDFLLANLSYEHSSGREAVLEMLHAIIKKFPQTKLDEQSHTLFVHLVARLANDHDNKVRSMTGVAIKLLIERINPHMLHSILEYSLSWYLCMKQQLWSAGAQVLGLLVEVMKRNFQRHISAVLPVTRSILQSTINIVRDGQLDLSDEVTIPFWKEAYYSLVLLEKILCQFPDLIFDRDLENIWEAICELMLHPHTWLRNRSNRLIALYFSALTEASKQHQEKARENLFLMKPSRIFMIAVSLCYQLETQLTFDEAFSNRITQNLVSAICTMHSLREQRECIDPHNFWSALGPHEQGLFLKAFKLLESRKGKGIFLSIISSTSDQNDQDQPKDFQFLLVSNLLRKMGKIALQKEAVQMKIVFNSFRLISSEIGPSHCQLYAYQMLPSLYKVCEGFAGKLITDDMKQLAQEVSDSIRNTVGSQNFVQIYNEIRKNLKQKRDKRKQEEKVMAVVNPVRNAKRKLRIAAKHRVNKKRKMMTMKMGRWLR